Introduction to the Biological Sciences I (Biology 210A)

San Diego Mesa College (4.0 units, Grade Only)

 


Instructor: Anar Brahmbhatt, Ph.D.                                                                 Voicemail: (619) 388-2273          

Lecture Hours: MW 1:00-2:20 pm Room I-117                                    Mail Box: K-202

Lab Hours: CRN 81359 M 9:45 am-12:50 pm Room I-3412

        CRN 51078 W 10:00 am-12:50 pm Room I-3412                           E-mail: abrahmbh@sdccd.edu

Office Hours:  MW 2:30-4:00 pm, TTh 4:00-5:00 pm or by                             (*please give up to 24 hours

appointment in Room F-216B                                                                   to respond to e-mail)

WebCT Link: http://www.sdccdonline.net/

Website Link: http://homework.sdmesa.edu/abrahmbhatt/

                       

 

Required Texts: Biology, 7th edition, Campbell and Reece, ©2005, Benjamin Cummings

Symbiosis, A. Brahmbhatt and D. Phiri, ©2006, Benjamin Cummings (1st lab packet)

W.H. Freeman Custom Publishing for Bio 210A, Helms, ©2006, W. H. Freeman (2nd lab packet)

*(Reserve copies are available in the LRC; reserve copies of CD-ROM available to be used in the CIL on the 4th floor of the LRC)

 

Required materials:

Scantron sheets (#882-E)                   No. 2 pencil for exams

                                                           

Recommended: Student Study Guide (to accompany Campbell) by Martha Taylor, Addison Wesley, ©2005

           

COURSE DESCRIPTION:  This course will emphasize biological chemistry, cellular structure, cellular metabolism, classical and molecular genetics, and evolutionary biology.  This is the first semester of a two-semester sequence designed for biological science majors and students planning to transfer. (FT) Transfer credit: CSU and/or private college/university; UC Biology (BIOL) 210A & B combined with 215 and 250: maximum credit, one series.

 

PREREQUISITES: Chem 151 or Chem 152 and Chem 152L, with a grade of “C” or better. Completion of English 051 with a grade of “C” or better, or Assessment Skill level W5 and English 056, with grade of “C” or better, or Assessment Skill level R5. Concurrent enrollment in Chem 200 & Chem 200L; Majors in the Biological Sciences should take Chem 200 & Chem 200L concurrently with Biol 210A.

 

COURSE OBJECTIVES:  Upon completion of this course, students will have mastered and learned to apply the following themes and concepts:

  • Eleven themes in the study of life: Exploring Life on its many levels; evolution, unity and diversity; the process of science
  • The Chemical Context of Life: chemical elements and compounds, atoms and molecules, water and the fitness of the environment: the effects of water’s polarity; the dissociation of water molecules
  • Carbon and Molecular Diversity of Life: the importance of carbon, functional groups
  • The Structure and Function of Macromolecules: polymer principles; Carbohydrates—fuel and building material; Lipids—diverse hydrophobic molecules; Proteins—many structures and functions; Nucleic acids—informational polymers
  • Metabolism: Energy and Life: Enzymes and the control of metabolism
  • The Cell: how we study cells, panoramic view of the cell: organelles, cytoskeleton, cell surfaces and junctions
  • Membrane Structure and Function: membrane structure, traffic across the membrane
  • Cellular Respiration: principles of energy harvest, cellular respiration, and related metabolic processes
  • Photosynthesis: Photosynthesis in nature, pathways of photosynthesis
  • Cell Communication: an overview of cell signaling; signal reception and the initiation of transduction; signal-transduction pathways; cellular response signals (hormone and endocrine systems); nervous system
  • The Cell Cycle: Mitosis; regulation of the cell cycle; an introduction to heredity; origins of genetic variation; extending Mendelian genetics; Mendelian inheritance in humans
  • The Chromosomal Basis of Inheritance: relating Mendelism to chromosomes; sex chromosomes; errors and exceptions in chromosomal inheritance
  • Molecular Basis of Inheritance: DNA as genetic material; DNA replication and repair; the connection between gene and proteins; synthesis and processing of RNA; synthesis of proteins
  • The Genetics of Viruses and Bacteria: Processes by which genetic information is shared, transferred and manipulated
  • The Organization and Control of Eukaryotic Genomes: eukaryotic chromatin structure; genome organization; control of gene expression; the molecular biology of cancer
  • DNA Technology and Genomics: DNA cloning; DNA analysis and genomics; practical applications of DNA technology
  • The Immune System: Innate versus acquired immunity; humoral and cell-mediated immunity; diseases related to immune system
  • Evolution: Darwin’s Theory and Population Genetics

 

ATTENDANCE:  Attendance in lecture and lab is mandatory.  If you do not attend the first day of class, you may be dropped.  I will record attendance and drop students with excessive absences. It is the student’s responsibility to drop this course before the final drop deadline if you cannot stay in the class.  Failure to do so will result in an F in the course.  A portion of the material covered in class will NOT be found in the text but will appear on the exams. Not surprisingly, poor attendance is highly correlated to low exam scores. Should you miss a lecture or lab, please contact a classmate and obtain the information and materials you missed.

 

ACCOMMODATION OF DISABILITY:  A student with a verifiable disability may be entitled to appropriate academic accommodations. Please consult with me immediately if you have or suspect you may have a disability so that appropriate arrangements can be made with the DSPS office.

 

IMPORTANT DATES TO REMEMBER: 

            Sept 4             Labor Day

Sept 15           Deadline to drop classes with no “W” recorded    

Sept 18           Last day to drop and be eligible for refund of enrollment fees and/or non-resident tuition

            Oct 5               Last day to file a petition for Credit/No Credit grade option

            Nov 10                        Veteran’s Day (Holiday)

            Nov 13                        Withdrawal deadline—no drops accepted after this date

            Nov 23-24       Thanksgiving Holiday

 

 

 

 

EVALUATION:  Students will be evaluated based on the following criteria:

I. Lecture:

§         5 lecture exams total (100 points each).  The first and fourth exams will be take-home exams (consisting of multiple-choice questions) and Exams 2, 3, and 5 will be given in-class (consisting of multiple-choice, short answer questions and essay questions covering lecture material and chapter readings). Please bring a scantron (#882-E) and No. 2 pencil to all lecture exams.

§         In addition, supplementary assignments to aid you in your comprehension of course material will be distributed and graded throughout the course. All assignments will be due at the beginning of class on the assigned dates, no exceptions.

 

II. Laboratory: Laboratory exercises will be graded on a 10-point scale for each of the assigned reports to be announced in the lab session.  In order to submit and receive credit for a lab report, you must attend the entire lab section for that particular experiment. All lab reports are due at the beginning of the lab period the following week, no exceptions. Late or incomplete reports will receive a zero grade.  Lab reports must be complete in order to receive a grade: name, neatly organized and stapled. Please follow the Laboratory Guide for Biology 210A handout for guidelines.

 

III. Term paper: A term paper will be assigned early on in the course. You will be submitting this paper through Turnitin.com and will receive further guidelines regarding this assignment at that time.

 

IV. Attendance: You will also earn points for attendance.  Remember, attendance is mandatory and that excessive absences will lead to being dropped from the course

 

Grades: No make-up exams will be given for lecture exams or lab sessions and reports.  No lecture exam, homework assignment, or lab report scores will be dropped. The following is the grading scale for this class:

 

Tentative breakdown of scoring:

3 Lecture exams                                   100 points each

2 Take-Home exams                            100 points each

Lecture assignments (2-5)                   10-60 points each

Lab reports (10-13)                               10 points each

Term paper                                           100 points

Attendance                                           100 points

A= 90-100%

B= 80-89%

C= 70-79%

D= 60-69%

F= less than 60%

 

 

METHOD OF INSTRUCTION: The primary method of instruction will be a lecture-discussion presentation. Numerous articles and stories regarding science and technology that headline the news or have done so in the recent past may form a foundational basis for discussion within the classroom.  Please be prepared to read any assigned articles and take part in these discussions.

 

 

 

 

 

 

 

BEHAVIOR: I will make every attempt to teach the class with patience and respect and expect the same from each student in this course. While academic inquiry is always welcome, disruptive behavior is not. Please observe the following in the interest of maintaining a pleasant class environment for everyone:

  • Please address all questions and comments to me, private discussions are disruptive
  • Please turn off all communication devices during lecture and/or lab
  • Please do not disrupt class by arriving late or leaving early. DO NOT submit late work to the instructor while lecture is taking place.
  • Eating, drinking, chewing gum and smoking are not permitted in the lecture or lab
  • Policy 3100 outlines the rights and responsibilities of students; please consult this policy for further information
  • This class will be conducted in accordance with the college student code of conduct and basic standards of academic honesty.  Cheating, plagiarism or other forms of academic dishonesty are not acceptable and will be referred to the Disciplinary Committee.

 

Plagiarism: The act of incorporating ideas, words, or specific substance of another, whether purchased, borrowed, or otherwise obtained, and submitting the same as one's own work to fulfill academic requirements without giving credit to the appropriate source. Examples of plagiarism include but are not limited to the following:

  1. Submitting work, either in part or in whole, completed by another;
  2. Omitting footnotes for ideas, statements, facts or conclusions which belong to another;
  3. Omitting quotation marks when quoting directly from another, whether it be a paragraph, sentence, or part thereof;
  4. Close and lengthy paraphrasing of the writing or work of another, with or without acknowledgment;
  5. And submitting papers purchased from research companies (or downloaded from electronic source) as one's own work.

HOW TO SUCCEED IN BIOLOGY 210A: 


  • Come to class prepared-read the assigned pages in advance
  • Review the concepts soon after class
  • Participate-take part in class discussions
  • TAKE NOTES!
  • Form small study groups
  • Make sure that you understand any material missed on a previous exam
  • ASK QUESTIONS: email, during class and after, attend office hours!!
  • Come to me with any concerns--Remember that I am here to help!

 

 

Tentative Lecture Schedule

WEEK

DATES

TOPIC

CHAPTER

1

9/6

Exploring Life

*The Chemical Context of Life

*Water and the Fitness of the Environment

*Carbon and the Molecular Diversity of Life

*(Chapters 2-4 will not be covered in lecture but will be covered during Take-Home Exam #1)

1

2

3

4

2

9/11, 9/13

The Structure and Function of Macromolecules

A Tour of the Cell

5, 6

3

9/18, 9/20

A Tour of the Cell (Continued)

Membrane Structure and Function

Take-Home Exam #1 (Ch. 2, 3, 4) Due- Wednesday, September 20, 2006

6

7

4

9/25, 9/27

Membrane Structure and Function (Continued)

Introduction to Metabolism

 

7

8

5

10/2, 10/4

Rough Draft for Term Paper Due-Monday, October 2, 2006

Introduction to Metabolism

 

 

8

 

6

10/9, 10/11

Exam #2 (Ch. 1, 5, 6, 7, 8)-Monday, October 9, 2006

Cellular Respiration: Harvesting Chemical Energy

9

7

10/16, 10/18

Photosynthesis

 

10

8

10/23, 10/25

Cell Communication

Hormones and the Endocrine system

Nervous systems

(Ch. 45 and 48 also discussed further in lab sections)

*TERM PAPER DUE: Wednesday October 25, 2006

11, 45 (p. 943-952), 48 (p. 1013-1025, 1037-1041)

9

10/30, 11/1

Nervous systems (Continued)

Mendel and the Gene Idea

 48

 14

10

11/6, 11/8

Mendel and the Gene Idea (Continued)

Exam #3 (Ch. 9, 10, 11, 45, 48), Wednesday, November 8, 2006

14

11

11/13, 11/15

The Chromosomal Basis of Inheritance       

The Molecular Basis of Inheritance

15

16

 

12

11/20, 11/22

From Gene to Protein

 

17

13

11/27, 11/29

Microbial Models: The Genetics of Viruses and Bacteria 

 

18

14

12/4, 12/6

 

Take-Home Exam #4 (Ch. 14, 15, 16, 17) Due-Monday, December 4, 2006

Eukaryotic Genomes: Organization, Regulation, and Evolution

 

 

19

 

15

12/11, 12/13

DNA Technology and Genomics

Descent with Modification: A Darwinian View of Life

The Immune system (Given as a take-home assignment only)

20

22

43

 

16

12/18, 12/20

Descent with Modification: A Darwinian View of Life (Cont’d)

The Evolution of Populations

Exam #5 (Ch. 18, 19, 20, 22, 23), Wednesday, December 20, 2006

22

23

*The Cell Cycle (Ch. 12) and Meiosis and Sexual Life Cycles (Ch. 13) will be discussed in lab sections

 

  **All text should be read BEFORE you come to lecture.   Note:  Exam dates are boldfaced